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Top Links: >> 80. Technology >> Internet Technology Summit Program >> 9. AI with Python >> 9.1. The Python Tutorial Introduction >> 9.1.1. Python Docs, Lexicon, and Components >> 9.1.1.3. Python Internals
Current Topic: 9.1.1.3.10. Buffer Protocol
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Certain objects available in Python wrap access to an underlying memory array or buffer. Such objects include the built-in bytes and bytearray, and some extension types like array.array. Third-party libraries may define their own types for special purposes, such as image processing or numeric analysis.


While each of these types have their own semantics, they share the common characteristic of being backed by a possibly large memory buffer. It is then desirable, in some situations, to access that buffer directly and without intermediate copying.


Python provides such a facility at the C level in the form of the buffer protocol. This protocol has two sides:



Simple objects such as bytes and bytearray expose their underlying buffer in byte-oriented form. Other forms are possible; for example, the elements exposed by an array.array can be multi-byte values.


An example consumer of the buffer interface is the write() method of file objects: any object that can export a series of bytes through the buffer interface can be written to a file. While write() only needs read-only access to the internal contents of the object passed to it, other methods such as readinto() need write access to the contents of their argument. The buffer interface allows objects to selectively allow or reject exporting of read-write and read-only buffers.


There are two ways for a consumer of the buffer interface to acquire a buffer over a target object:



In both cases, PyBuffer_Release() must be called when the buffer isn?t needed anymore. Failure to do so could lead to various issues such as resource leaks.




Buffer structure


Buffer structures (or simply ?buffers?) are useful as a way to expose the binary data from another object to the Python programmer. They can also be used as a zero-copy slicing mechanism. Using their ability to reference a block of memory, it is possible to expose any data to the Python programmer quite easily. The memory could be a large, constant array in a C extension, it could be a raw block of memory for manipulation before passing to an operating system library, or it could be used to pass around structured data in its native, in-memory format.


Contrary to most data types exposed by the Python interpreter, buffers are not PyObject pointers but rather simple C structures. This allows them to be created and copied very simply. When a generic wrapper around a buffer is needed, a memoryview object can be created.


For short instructions how to write an exporting object, see Buffer Object Structures. For obtaining a buffer, see PyObject_GetBuffer().




Py_buffer





void *
buf



A pointer to the start of the logical structure described by the buffer fields. This can be any location within the underlying physical memory block of the exporter. For example, with negative strides the value may point to the end of the memory block.


For contiguous arrays, the value points to the beginning of the memory block.






void *
obj



A new reference to the exporting object. The reference is owned by the consumer and automatically decremented and set to NULL by PyBuffer_Release(). The field is the equivalent of the return value of any standard C-API function.


As a special case, for temporary buffers that are wrapped by PyMemoryView_FromBuffer() or PyBuffer_FillInfo() this field is NULL. In general, exporting objects MUST NOT use this scheme.






Py_ssize_t
len



product(shape) * itemsize. For contiguous arrays, this is the length of the underlying memory block. For non-contiguous arrays, it is the length that the logical structure would have if it were copied to a contiguous representation.


Accessing ((char *)buf)[0] up to ((char *)buf)[len-1] is only valid if the buffer has been obtained by a request that guarantees contiguity. In most cases such a request will be PyBUF_SIMPLE or PyBUF_WRITABLE.






int
readonly



An indicator of whether the buffer is read-only. This field is controlled by the PyBUF_WRITABLE flag.






Py_ssize_t
itemsize



Item size in bytes of a single element. Same as the value of struct.calcsize() called on non-NULL format values.


Important exception: If a consumer requests a buffer without the PyBUF_FORMAT flag, format will be set to NULL, but itemsize still has the value for the original format.


If shape is present, the equality product(shape) * itemsize == len still holds and the consumer can use itemsize to navigate the buffer.


If shape is NULL as a result of a PyBUF_SIMPLE or a PyBUF_WRITABLE request, the consumer must disregard itemsize and assume itemsize == 1.






const char *
format



A NUL terminated string in struct module style syntax describing the contents of a single item. If this is NULL, "B" (unsigned bytes) is assumed.


This field is controlled by the PyBUF_FORMAT flag.






int
ndim



The number of dimensions the memory represents as an n-dimensional array. If it is 0, buf points to a single item representing a scalar. In this case, shape, strides and suboffsets MUST be NULL.


The macro PyBUF_MAX_NDIM limits the maximum number of dimensions to 64. Exporters MUST respect this limit, consumers of multi-dimensional buffers SHOULD be able to handle up to PyBUF_MAX_NDIM dimensions.






Py_ssize_t *
shape



An array of Py_ssize_t of length ndim indicating the shape of the memory as an n-dimensional array. Note that shape[0] * ... * shape[ndim-1] * itemsize MUST be equal to len.


Shape values are restricted to shape[n] >= 0. The case shape[n] == 0 requires special attention. See complex arrays for further information.


The shape array is read-only for the consumer.






Py_ssize_t *
strides



An array of Py_ssize_t of length ndim giving the number of bytes to skip to get to a new element in each dimension.


Stride values can be any integer. For regular arrays, strides are usually positive, but a consumer MUST be able to handle the case strides[n] <= 0. See complex arrays for further information.


The strides array is read-only for the consumer.






Py_ssize_t *
suboffsets



An array of Py_ssize_t of length ndim. If suboffsets[n] >= 0, the values stored along the nth dimension are pointers and the suboffset value dictates how many bytes to add to each pointer after de-referencing. A suboffset value that is negative indicates that no de-referencing should occur (striding in a contiguous memory block).


If all suboffsets are negative (i.e. no de-referencing is needed), then this field must be NULL (the default value).


This type of array representation is used by the Python Imaging Library (PIL). See complex arrays for further information how to access elements of such an array.


The suboffsets array is read-only for the consumer.






void *
internal



This is for use internally by the exporting object. For example, this might be re-cast as an integer by the exporter and used to store flags about whether or not the shape, strides, and suboffsets arrays must be freed when the buffer is released. The consumer MUST NOT alter this value.









Buffer request types


Buffers are usually obtained by sending a buffer request to an exporting object via PyObject_GetBuffer(). Since the complexity of the logical structure of the memory can vary drastically, the consumer uses the flags argument to specify the exact buffer type it can handle.


All Py_buffer fields are unambiguously defined by the request type.



request-independent fields


The following fields are not influenced by flags and must always be filled in with the correct values: obj, buf, len, itemsize, ndim.




readonly, format






PyBUF_WRITABLE



Controls the readonly field. If set, the exporter MUST provide a writable buffer or else report failure. Otherwise, the exporter MAY provide either a read-only or writable buffer, but the choice MUST be consistent for all consumers.






PyBUF_FORMAT



Controls the format field. If set, this field MUST be filled in correctly. Otherwise, this field MUST be NULL.






PyBUF_WRITABLE can be |?d to any of the flags in the next section. Since PyBUF_SIMPLE is defined as 0, PyBUF_WRITABLE can be used as a stand-alone flag to request a simple writable buffer.


PyBUF_FORMAT can be |?d to any of the flags except PyBUF_SIMPLE. The latter already implies format B (unsigned bytes).




shape, strides, suboffsets


The flags that control the logical structure of the memory are listed in decreasing order of complexity. Note that each flag contains all bits of the flags below it.











































Request

shape

strides

suboffsets




PyBUF_INDIRECT



yes

yes

if needed




PyBUF_STRIDES



yes

yes

NULL




PyBUF_ND



yes

NULL

NULL




PyBUF_SIMPLE



NULL

NULL

NULL





contiguity requests


C or Fortran contiguity can be explicitly requested, with and without stride information. Without stride information, the buffer must be C-contiguous.

















































Request

shape

strides

suboffsets

contig




PyBUF_C_CONTIGUOUS



yes

yes

NULL

C




PyBUF_F_CONTIGUOUS



yes

yes

NULL

F




PyBUF_ANY_CONTIGUOUS



yes

yes

NULL

C or F




PyBUF_ND


yes

NULL

NULL

C




compound requests


All possible requests are fully defined by some combination of the flags in the previous section. For convenience, the buffer protocol provides frequently used combinations as single flags.


In the following table U stands for undefined contiguity. The consumer would have to call PyBuffer_IsContiguous() to determine contiguity.
























Was it clear so far?









































































Request

shape

strides

suboffsets

contig

readonly

format




PyBUF_FULL



yes

yes

if needed

U

0

yes




PyBUF_FULL_RO



yes

yes

if needed

U

1 or 0

yes




PyBUF_RECORDS



yes

yes

NULL

U

0

yes




PyBUF_RECORDS_RO



yes

yes

NULL

U

1 or 0

yes




PyBUF_STRIDED



yes

yes

NULL

U

0

NULL




PyBUF_STRIDED_RO



yes

yes

NULL

U

1 or 0

NULL




PyBUF_CONTIG



yes

NULL

NULL

C

0

NULL




PyBUF_CONTIG_RO



yes

NULL

NULL

C

1 or 0

NULL





Complex arrays



NumPy-style: shape and strides


The logical structure of NumPy-style arrays is defined by itemsize, ndim, shape and strides.


If ndim == 0, the memory location pointed to by buf is interpreted as a scalar of size itemsize. In that case, both shape and strides are NULL.


If strides is NULL, the array is interpreted as a standard n-dimensional C-array. Otherwise, the consumer must access an n-dimensional array as follows:




ptr = (char *)buf + indices[0] * strides[0] + ... + indices[n-1] * strides[n-1];
item = *((typeof(item) *)ptr);



As noted above, buf can point to any location within the actual memory block. An exporter can check the validity of a buffer with this function:




def verify_structure(memlen, itemsize, ndim, shape, strides, offset):
"""Verify that the parameters represent a valid array within
the bounds of the allocated memory:
char *mem: start of the physical memory block
memlen: length of the physical memory block
offset: (char *)buf - mem
"""
if offset % itemsize:
return False
if offset < 0 or offset+itemsize > memlen:
return False
if any(v % itemsize for v in strides):
return False

if ndim <= 0:
return ndim == 0 and not shape and not strides
if 0 in shape:
return True

imin = sum(strides[j]*(shape[j]-1) for j in range(ndim)
if strides[j] <= 0)
imax = sum(strides[j]*(shape[j]-1) for j in range(ndim)
if strides[j] > 0)

return 0 <= offset+imin and offset+imax+itemsize <= memlen





PIL-style: shape, strides and suboffsets


In addition to the regular items, PIL-style arrays can contain pointers that must be followed in order to get to the next element in a dimension. For example, the regular three-dimensional C-array char v[2][2][3] can also be viewed as an array of 2 pointers to 2 two-dimensional arrays: char (*v[2])[2][3]. In suboffsets representation, those two pointers can be embedded at the start of buf, pointing to two char x[2][3] arrays that can be located anywhere in memory.


Here is a function that returns a pointer to the element in an N-D array pointed to by an N-dimensional index when there are both non-NULL strides and suboffsets:




void *get_item_pointer(int ndim, void *buf, Py_ssize_t *strides,
Py_ssize_t *suboffsets, Py_ssize_t *indices) {
char *pointer = (char*)buf;
int i;
for (i = 0; i < ndim; i++) {
pointer += strides[i] * indices[i];
if (suboffsets[i] >=0 ) {
pointer = *((char**)pointer) + suboffsets[i];
}
}
return (void*)pointer;
}










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ptr = (char *)buf + indices[0] * strides[0] + ... + indices[n-1] * strides[n-1];
item = *((typeof(item) *)ptr);



As noted above, buf can point to any location within the actual memory block. An exporter can check the validity of a buffer with this function:




def verify_structure(memlen, itemsize, ndim, shape, strides, offset):
"""Verify that the parameters represent a valid array within
the bounds of the allocated memory:
char *mem: start of the physical memory block
memlen: length of the physical memory block
offset: (char *)buf - mem
"""
if offset % itemsize:
return False
if offset < 0 or offset+itemsize > memlen:
return False
if any(v % itemsize for v in strides):
return False

if ndim <= 0:
return ndim == 0 and not shape and not strides
if 0 in shape:
return True

imin = sum(strides[j]*(shape[j]-1) for j in range(ndim)
if strides[j] <= 0)
imax = sum(strides[j]*(shape[j]-1) for j in range(ndim)
if strides[j] > 0)

return 0 <= offset+imin and offset+imax+itemsize <= memlen





PIL-style: shape, strides and suboffsets


In addition to the regular items, PIL-style arrays can contain pointers that must be followed in order to get to the next element in a dimension. For example, the regular three-dimensional C-array char v[2][2][3] can also be viewed as an array of 2 pointers to 2 two-dimensional arrays: char (*v[2])[2][3]. In suboffsets representation, those two pointers can be embedded at the start of buf, pointing to two char x[2][3] arrays that can be located anywhere in memory.


Here is a function that returns a pointer to the element in an N-D array pointed to by an N-dimensional index when there are both non-NULL strides and suboffsets:




void *get_item_pointer(int ndim, void *buf, Py_ssize_t *strides,
Py_ssize_t *suboffsets, Py_ssize_t *indices) {
char *pointer = (char*)buf;
int i;
for (i = 0; i < ndim; i++) {
pointer += strides[i] * indices[i];
if (suboffsets[i] >=0 ) {
pointer = *((char**)pointer) + suboffsets[i];
}
}
return (void*)pointer;
}











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